A series of strategic lessons and a supportive meeting space for all levels to learn, share, and implement the philosophies, tools, and methodologies of bioinformatics. These sessions are designed around research workstreams and various bioinformatics applications.
This practical session will be an introduction to Nextflow via a demonstration of an introductory Nextflow pipeline and an interactive guide through running the nf-core RNAseq pipeline. Students will need a GitHub account, which can be downloaded through the chrome extension, GitPod (https://www.gitpod.io/docs/configure/user-settings/browser-extension) and register for GitPod. Basic command line knowledge would be helpful, but […]
A series of strategic lessons and a supportive meeting space for all levels to learn, share, and implement the philosophies, tools, and methodologies of bioinformatics. These sessions are designed around research workstreams and various bioinformatics applications.
The in-person follow-up session for the Single-Cell Transcriptomics course offers a unique opportunity to strengthen your understanding of single-cell RNA-seq analysis through practical, hands-on exercises. After completing the online course, you can attend this session to explore advanced workflows, clarify any questions you may have, and receive personalized guidance from the instructor.
This workshop provides an introduction to bioinformatics workflow managers, with a focus on Nextflow. Participants will gain an understanding of workflow management concepts and learn how to use Nextflow to develop scalable, reproducible, and portable bioinformatics pipelines. The session will include an overview of key features, practical examples, and guidance on best practices for implementing […]
The in-person follow-up session for the NGS: ATAC-seq course provides an excellent opportunity to solidify your understanding of ATAC-seq data analysis and visualization in a hands-on environment. After completing the online course, you can attend this session to delve into advanced exercises, resolve any uncertainties, and benefit from personalized instruction from the course leader.
