The Data Club is an informal forum for biologists and coders to discuss various aspects of trajectory analysis, accompanied by brief examples for discussion. Our goal is to explore different topics related to trajectory analysis and visualization, with a particular focus on methodology and interpretation challenges. There may be opportunities for members to present their […]

This practical session will be an introduction to Nextflow via a demonstration of an introductory Nextflow pipeline and an interactive guide through running the nf-core RNAseq pipeline. Students will need a GitHub account, which can be downloaded through the chrome extension, GitPod (https://www.gitpod.io/docs/configure/user-settings/browser-extension) and register for GitPod. Basic command line knowledge would be helpful, but […]

This workshop provides an introduction to bioinformatics workflow managers, with a focus on Nextflow. Participants will gain an understanding of workflow management concepts and learn how to use Nextflow to develop scalable, reproducible, and portable bioinformatics pipelines. The session will include an overview of key features, practical examples, and guidance on best practices for implementing […]

The Data Club is an informal forum for biologists and coders to discuss various aspects of cell-to-cell communication using CellChat, accompanied by brief examples for discussion. Our goal is to explore different topics related to cellChat analysis and visualization, with a particular focus on methodology and interpretation challenges. There may be opportunities for members to […]

Title: Single Cell Profiling of Airway Samples in Severe Asthma Dr Onofrio Zanin obtained a PhD in molecular biology at the University of Birmingham, where he investigated the mechanisms of RNA transcription and RNA metabolism associated with defects in RNA capping. He subsequently moved to King’s College London, where he is currently studying the cellular […]

Title: AMIRA: Animal-free Mechanistic Inference for Species-Specific Chemical Risk Assessment Richa Malik is a PhD researcher in computational toxicology at King’s College London, developing machine-learning approaches to predict species-specific sensitivity to chemicals and pharmaceuticals, supporting the development of next generation, animal-free, chemical safety assessment strategies. Using large-scale multi-modal datasets, her work focuses on identifying when […]

£25 KCL Staff/Students or £50 external, register on eStore here Instructor: Dr. Simon Murray from Genomics England. This practical session will be an introduction to Nextflow, a powerful computational pipeline constructor, via a demonstration of an introductory Nextflow pipeline and an interactive, guided experience of running through the nf-core RNAseq pipeline. Students will need a […]

Instructors: Drs. Ira Iosub and Charlotte Capitanchik £25 KCL Staff/Students or £50 external, register on eStore here This workshop provides an introduction to bioinformatics workflow managers, with a focus on Nextflow. Participants will gain an understanding of workflow management concepts and learn how to use Nextflow to develop scalable, reproducible, and portable bioinformatics pipelines. The session […]